4.2.2.1The human digestive system
The digestive system is an example of an organ system in which several organs work together to digest and absorb food. Digestive enzymes convert food into small soluble molecules that can be absorbed into the bloodstream.
Enzymes catalyse specific reactions in living organisms due to the shape of their active site. Each enzyme has an active site of a particular shape, and only a substrate that fits it will react — which is why one enzyme does one job.
Enzymes are not only digestive. Metabolism is the sum of all the reactions in a cell or in the body, and enzymes catalyse those reactions too — building new carbohydrates, lipids and proteins from the products of digestion, and breaking glucose down in respiration. The digestive enzymes here are one visible corner of it.
You are expected to use the lock and key theory as a simplified model to explain enzyme action. Simplified is the operative word — it explains specificity and it explains denaturing, and it is not a picture of what a real enzyme looks like. If a question offers you another model, use that one on its own terms.
Temperature and pH matter because both change the shape of the active site. Raising the temperature speeds the reaction up at first, because molecules collide more often; past the optimum the enzyme denatures, the active site loses its shape, and the substrate no longer fits. The wrong pH does the same thing. A denatured enzyme has not been "killed" — it was never alive — its shape has changed.
The products of digestion are used to build new carbohydrates, lipids and proteins, and some glucose is used in respiration. Word equations are enough here — no chemical symbol equations are required.
Bile is made in the liver and stored in the gall bladder. It does two things, and questions usually want both. It is alkaline, so it neutralises hydrochloric acid from the stomach, giving the enzymes of the small intestine the alkaline conditions they work best in. It also emulsifies fat into small droplets, which increases the surface area. Together, the alkaline conditions and the large surface area increase the rate of fat breakdown by lipase.
Common mistake
Bile is not an enzyme and it does not digest fat. It emulsifies fat — breaking it into droplets — so that lipase can work faster. Saying "bile breaks down fat" loses the mark.
Required practical 4
Use qualitative reagents to test for a range of carbohydrates, lipids and proteins
- Benedict's test for sugars: add Benedict's solution and heat in a water bath at about 75 °C. Blue means none; green, yellow, orange or brick red means increasing amounts of sugar.
- Iodine test for starch: add iodine solution. Orange-brown stays orange-brown if there is no starch; blue-black means starch is present.
- Biuret test for protein: add Biuret reagent. Blue means no protein; purple or lilac means protein is present.
- Emulsion test for lipids: add ethanol, shake, then add water. A cloudy white emulsion means lipid is present.
Watch out: These are qualitative tests — they tell you whether something is there, and Benedict's roughly how much, but they are not measurements. Say "turns blue-black, showing starch is present", naming the colour change and the conclusion.
Required practical 5
Investigate the effect of pH on the rate of reaction of amylase enzyme
- Set up starch solution with amylase and a buffer at a known pH, in a water bath so temperature is controlled.
- Every 30 seconds, take a drop of the mixture and add it to iodine solution on a spotting tile — this is the continuous sampling technique.
- The iodine stays orange-brown once all the starch has been digested. Record the time at which that happens.
- Repeat at a range of pH values and compare the times.
Watch out: Temperature must be controlled with a water bath or electric heater, or you cannot claim the change in rate was caused by pH. The shortest time means the fastest rate, so a graph of time against pH is upside down compared with one of rate against pH.
Worked example
Starch is completely digested in 90 seconds at pH 7, and in 150 seconds at pH 5. Calculate the rate of reaction at each pH in s⁻¹, and say which is faster.
- Rate of reaction = 1 ÷ time.
- At pH 7: 1 ÷ 90 = 0.011 s⁻¹.
- At pH 5: 1 ÷ 150 = 0.0067 s⁻¹.
Answer: pH 7 is faster — 0.011 s⁻¹ against 0.0067 s⁻¹ — because a shorter time means a higher rate.
- Digestive system
- an organ system in which several organs work together to digest and absorb food
- Enzyme
- a biological catalyst that speeds up a specific reaction in a living organism because of the shape of its active site
- Active site
- the part of an enzyme where the substrate binds; only a substrate with a matching shape will react, which is why one enzyme does one job
- Denatured
- describes an enzyme whose active site has lost its shape, usually through high temperature or the wrong pH, so the substrate no longer fits
- Metabolism
- the sum of all the reactions in a cell or in the body
- Bile
- an alkaline liquid made in the liver and stored in the gall bladder, which neutralises stomach acid and emulsifies fat into small droplets to increase the surface area for lipase
4.2.2.2The heart and blood vessels
The heart is an organ that pumps blood around the body in a double circulatory system. The right ventricle pumps blood to the lungs, where gas exchange takes place; the left ventricle pumps blood around the rest of the body.
"Double" means blood passes through the heart twice on one full circuit. The advantage is pressure: blood leaving the lungs is slowed by the capillaries there, so returning it to the heart lets it be pumped out to the body at high pressure again.
The named vessels are a fixed list: the aorta, vena cava, pulmonary artery, pulmonary vein and coronary arteries. The names of the heart valves are not required.
Knowledge of the lungs is restricted to the trachea, bronchi, alveoli and the capillary network surrounding the alveoli. The alveoli are the exchange surface — millions of them, each with a wall one cell thick, surrounded by capillaries, and ventilated by breathing. Those are the four features of an effective exchange surface described under transport in cells, in one organ.
The natural resting heart rate is controlled by a group of cells in the right atrium that act as a pacemaker. Artificial pacemakers are electrical devices used to correct irregularities in the heart rate.
The body contains three types of blood vessel — arteries, veins and capillaries — and you should be able to explain how the structure of each relates to its function.
Arteries carry blood away from the heart at high pressure, so they have thick muscular and elastic walls and a narrow lumen. Veins return blood at low pressure, so the wall is thin and the lumen wide, and they contain valves to stop blood flowing backwards. Capillaries are where exchange happens, so their walls are one cell thick and permeable, giving a short diffusion path.
Worked example
A heart pumps 70 cm³ of blood per beat at 72 beats per minute. Calculate the rate of blood flow in dm³ per minute.
- Blood flow per minute = volume per beat × beats per minute.
- 70 × 72 = 5040 cm³ per minute.
- Convert: 1 dm³ = 1000 cm³, so 5040 ÷ 1000.
Answer: 5.04 dm³ per minute.
Common mistake
Arteries carry blood away from the heart and veins carry it back — that is the definition, and it has nothing to do with oxygen. The pulmonary artery carries deoxygenated blood, and the pulmonary vein carries oxygenated blood. Both are still correctly named.
- Double circulatory system
- a system in which blood passes through the heart twice on one full circuit: the right ventricle pumps blood to the lungs and the left ventricle pumps it around the rest of the body
- Artery
- a blood vessel that carries blood away from the heart at high pressure, with thick muscular and elastic walls and a narrow lumen
- Vein
- a blood vessel that returns blood to the heart at low pressure, with a thin wall, a wide lumen and valves to stop blood flowing backwards
- Capillary
- a blood vessel where exchange happens, with a permeable wall one cell thick giving a short diffusion path
- Pacemaker
- a group of cells in the right atrium that controls the natural resting heart rate; artificial pacemakers are electrical devices used to correct irregularities in the heart rate
4.2.2.3Blood
Blood is a tissue consisting of plasma, in which the red blood cells, white blood cells and platelets are suspended. You should know the function of each component, and be able to recognise the different cells in a photograph or diagram and explain how they are adapted to their functions.
Practical skill
Observing and drawing blood cells under a microscope
- Look at a prepared slide of a blood smear, starting on a low power objective and moving up.
- Find a field of view with all three: many small red blood cells, occasional larger white blood cells with a visible nucleus, and tiny platelet fragments.
- Draw a representative sample, not the whole field, with clear unbroken lines and no shading.
- Label each cell type and include a magnification scale.
Watch out: Red blood cells look paler in the middle. That is not bad staining — it is the biconcave shape, thinner at the centre, and saying so in a question about adaptation earns the mark.
Blood products — transfused blood, plasma or platelets — save lives, and they carry risks worth being able to evaluate: an infection can be passed on if donated blood is not screened, and a patient given the wrong blood group can have a serious immune reaction. Screening and cross-matching reduce both, which is why the risk in practice is very small. An answer that weighs the benefit against the managed risk is what an evaluation question is asking for.
- Blood
- a tissue consisting of plasma, in which the red blood cells, white blood cells and platelets are suspended
- Plasma
- the liquid part of the blood, in which the blood cells and platelets are suspended and dissolved substances are transported
4.2.2.4Coronary heart disease
In coronary heart disease, layers of fatty material build up inside the coronary arteries, narrowing them. This reduces the flow of blood through the coronary arteries, resulting in a lack of oxygen for the heart muscle.
The chain matters: narrowed artery → less blood → less oxygen → less respiration in the heart muscle. Questions ask for the steps, not just the outcome.
Stents are used to keep the coronary arteries open. Statins are widely used to reduce blood cholesterol levels, which slows down the rate of fatty material deposit.
In some people heart valves may become faulty, preventing the valve from opening fully, or the valve might develop a leak. A valve that will not open fully restricts blood flow; one that leaks lets blood flow backwards, so the heart works harder to move the same amount. Faulty heart valves can be replaced using biological or mechanical valves.
In the case of heart failure, a donor heart, or heart and lungs, can be transplanted. Artificial hearts are occasionally used to keep patients alive while waiting for a transplant, or to allow the heart to rest as an aid to recovery.
Common mistake
"Evaluate" means weigh both sides of a method of treatment, bearing in mind its benefits and its risks, and then come to a conclusion. Listing three advantages is half an answer. Say which treatment you would choose for the patient described and why — the judgement is what the last mark is for.
- Coronary heart disease
- a disease in which layers of fatty material build up inside the coronary arteries, narrowing them and reducing the flow of blood, resulting in a lack of oxygen for the heart muscle
- Stent
- a device used to keep a coronary artery open so blood can flow through it
- Statin
- a drug widely used to reduce blood cholesterol levels, which slows down the rate at which fatty material is deposited in the arteries
4.2.2.5Health issues
Health is the state of physical and mental well-being. Diseases, both communicable and non-communicable, are major causes of ill health, but other factors including diet, stress and life situations may have a profound effect on both physical and mental health.
Different types of disease may interact, and the four examples in the specification are worth learning as a set:
• Defects in the immune system mean an individual is more likely to suffer from infectious diseases. • Viruses living in cells can be the trigger for cancers. • Immune reactions initially caused by a pathogen can trigger allergies such as skin rashes and asthma. • Severe physical ill health can lead to depression and other mental illness.
This section is unusually mathematical for biology. You are expected to translate disease incidence information between graphical and numerical forms, construct and interpret frequency tables, bar charts and histograms, and use a scatter diagram to identify a correlation between two variables.
A scatter diagram shows correlation: as one variable rises the other tends to rise (positive), tends to fall (negative), or shows no pattern. Correlation is not proof of cause — that distinction is the whole point of the next section.
You also need the principles of sampling as applied to scientific data, including epidemiological data. A sample must be large enough that chance variation evens out, and representative of the population being studied — a survey of one hospital's patients tells you about that hospital, not about the country. Whenever you are asked why a conclusion is unreliable, sample size and sample bias are the two places to look first.
Common mistake
Health is not merely the absence of disease. The definition is a state of physical and mental well-being, and a question asking what health means wants both words.
- Health
- the state of physical and mental well-being
- Correlation
- a relationship in which two variables tend to change together; a correlation on its own does not show that one causes the other
4.2.2.6The effect of lifestyle on non-communicable diseases
Risk factors are linked to an increased rate of a disease. They can be aspects of a person's lifestyle, or substances in the person's body or environment. A causal mechanism has been proven for some risk factors, but not for others — and many diseases are caused by the interaction of a number of factors.
That sentence is the examiner's favourite trap. A risk factor being linked to a disease does not by itself show it causes it; a causal mechanism has to be demonstrated separately.
You are also asked to discuss the human and financial cost of these non-communicable diseases — to an individual, a local community, a nation or globally — and to explain the effect of lifestyle factors including diet, alcohol and smoking on their incidence at each of those levels.
Human cost is the illness and shortened life of the patient and the strain on the people around them. Financial cost is treatment and care, lost earnings for the individual, and for a country the cost to its health service plus the working days lost. A good answer names the level it is talking about rather than treating cost as one undifferentiated thing.
The table below does one risk factor at all four levels. In an exam you are usually given the data and asked to interpret it, so the skill is naming which level you are talking about and keeping human cost and financial cost apart.
Worked example
In a study, 20 out of 500 non-smokers and 60 out of 400 smokers developed a lung condition. Compare the incidence, and say what the data does and does not show.
- Non-smokers: 20 ÷ 500 = 0.04, which is 4%.
- Smokers: 60 ÷ 400 = 0.15, which is 15%.
- Compare: 15 ÷ 4 = 3.75.
Answer: The incidence is about 3.75 times higher in smokers. The data shows a correlation between smoking and the condition; on its own it does not prove smoking caused it, though a causal mechanism for smoking and lung disease has been established separately.
Common mistake
Do not write that a study "proves" a risk factor causes a disease. Data from a study shows a correlation. Cause is established by identifying a mechanism — which, for smoking and lung cancer, has been done.
- Risk factor
- an aspect of a person's lifestyle, or a substance in their body or environment, that is linked to an increased rate of a disease
- Causal mechanism
- a demonstrated explanation of how one factor brings about a disease; a risk factor is only shown to cause a disease when a causal mechanism has been proven
4.2.2.7Cancer
Cancer is the result of changes in cells that lead to uncontrolled growth and division.
Benign tumours are growths of abnormal cells which are contained in one area, usually within a membrane. They do not invade other parts of the body.
Malignant tumour cells are cancers. They invade neighbouring tissues and spread to different parts of the body in the blood, where they form secondary tumours.
Scientists have identified lifestyle risk factors for various types of cancer, and there are also genetic risk factors for some cancers.
Common mistake
A benign tumour is still abnormal growth and can still be dangerous — one pressing on the brain, for example. "Benign" means it does not invade or spread, not that it is harmless.
- Cancer
- the result of changes in cells that lead to uncontrolled growth and division
- Benign tumour
- a growth of abnormal cells contained in one area, usually within a membrane, which does not invade other parts of the body
- Malignant tumour
- a cancerous tumour whose cells invade neighbouring tissues and spread to different parts of the body in the blood, forming secondary tumours
Before you practise
- Enzymes are specific because of the shape of the active site; heat and the wrong pH denature them by changing that shape.
- Amylase breaks starch to simple sugars, protease breaks protein to amino acids, lipase breaks lipids to glycerol and fatty acids.
- Bile neutralises stomach acid and emulsifies fat to increase surface area — it is not an enzyme.
- Double circulation: right ventricle to the lungs, left ventricle to the rest of the body.
- Artery — thick wall, narrow lumen, high pressure, away from the heart. Vein — thin wall, wide lumen, valves, back to the heart. Capillary — one cell thick, for exchange.
- Blood is plasma plus red cells, white cells and platelets, each with its own adaptation.
- Coronary heart disease: fatty material narrows the coronary arteries, so the heart muscle gets less oxygen. Know stents, statins, valve replacement, transplant and artificial hearts, with both sides of each.
- Health is physical and mental well-being. Risk factors correlate with disease; a causal mechanism is a separate thing to establish.
- Benign tumours stay put; malignant tumours invade and spread in the blood to form secondary tumours.